MRIQC: individual T1w report

Summary

  • BIDS filename: sub-2012_ses-1_T1w.
  • Date and time: 2024-07-08, 16:57.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.4462569408759394
cnr2.9008634259359694
efc0.6203817235085973
fber369.1287503606591
fwhmavg3.9375199999999997
fwhmx4.19768
fwhmy3.98753
fwhmz3.62735
icvscsf0.21338819618627872
icvsgm0.4152614126709928
icvswm0.37135039114272844
inumed1.4099369049072266
inurange0.6639435827732088
qi10.0004251442667972559
qi20.004632310717297652
rpvecsf29.761989194849704
rpvegm15.611506300064187
rpvewm20.595576426716036
sizex192
sizey256
sizez256
snrcsf3.3304769982153415
snrgm10.86560758836384
snrtotal11.305291482078582
snrwm19.71978985965657
snrdcsf20.871453243288105
snrdgm45.04630196393116
snrdtotal42.01461433969198
snrdwm60.12608781185669
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk2.1275232209620816
summarybgmad10.896042218466981
summarybgmean33.492792472175495
summarybgmedian31.823047399520874
summarybgn2617178.0
summarybgp0517.267214059829712
summarybgp9555.726009011268616
summarybgstdv12.225754318932188
summarycsfk9.985002799125116
summarycsfmad86.32204320649569
summarycsfmean372.8728635072168
summarycsfmedian347.12808430194855
summarycsfn28685.0
summarycsfp05251.01677298545837
summarycsfp95570.3888809680939
summarycsfstdv104.22592131554693
summarygmk0.06834861618494692
summarygmmad67.17462921093721
summarygmmean752.8432923042795
summarygmmedian749.1973042488098
summarygmn15489.0
summarygmp05645.2658001184464
summarygmp95871.8944170475004
summarygmstdv68.94903142299647
summarywmk0.5917821818051698
summarywmmad44.747823868073134
summarywmmean994.5141190887053
summarywmmedian1000.0000208616257
summarywmn197266.0
summarywmp05897.46701836586
summarywmp951068.426707983017
summarywmstdv50.71035205377838
tpmoverlapcsf0.15608035027980804
tpmoverlapgm0.43237146735191345
tpmoverlapwm0.47638627886772156
wm2max0.6756496167381767
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime20:13:46.657500
BaseResolution256
CoilCombinationMethodAdaptive Combine
CoilStringT:HEA;HEP
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber35451
DwellTime3e-06
EchoTime0.00164
FlipAngle7
ImageOrientationPatientDICOM[-0.0261769, 0.999657, -3.53293e-08, 0.0331438, 0.000867864, -0.99945]
ImageOrientationTextSag>Tra(-1.9)>Cor(-1.5)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.223
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressExposition Drive 1777,Boulder-D4A842-,Denver,US,80301
InstitutionNameIntermountain Neuroimaging Consortium
InstitutionalDepartmentNameDepartment
InversionTime1.2
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNameTrioTim
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages5
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps255
PhaseResolution1
PixelBandwidth651
ProcedureStepDescriptionVMITTAL^frontalsub_200007
ProtocolNamemprage_5e
PulseSequenceDetails%CustomerSeq%\tfl_mgh_multiecho
ReceiveCoilNameHeadMatrix
ReconMatrixPE256
RefLinesPE32
RepetitionTime2.53
SAR0.0651499
ScanOptionsIR
ScanningSequenceGR\IR
SequenceNametfl3d5_ns
SequenceVariantSP\MP
SeriesDescriptionmprage_5e RMS
SeriesNumber3
ShimSetting[6773, 12571, -7172, -38, 281, -293, -1, 124]
SliceThickness1
SoftwareVersionssyngo MR B17
StationNameMRC35451
TxRefAmp342.981
md5sumac3e5212394735a01e7f9d9ba2d6a3ce
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.